Basic Information
Locus ID:
Thhalv10022689m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_11 | 2469888 | 2476017 | - | Thhalv10022689m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 49,501.43 Da | 44.37 | 100.49 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 11 | 428 | 2.17808E-47 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 388 | 1.9E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 12 | 421 | 4.71E-31 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 9 | 434 | 3.2E-32 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16980.2 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_006409366.1 | uncharacterized protein LOC18026299 [Eutrema salsugineum] | 0 |
| TrEMBL | V4M3M8 | Major facilitator superfamily protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022689mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology