Basic Information
Locus ID:
Thhalv10022647m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_11 | 121193 | 124240 | + | Thhalv10022647m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 59,517.78 Da | 38.24 | 79.38 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 94 | 470 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 294 | 405 | 3.2E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 98 | 245 | 1.2E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 480 | 3.91E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 182 | 422 | 2.4E-67 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 181 | 4.8E-34 | - |
| SMART | SM00133 | pkinase_C_6 | 406 | 471 | 2.4E-4 | IPR000961 |
| SMART | SM00220 | serkin_6 | 96 | 405 | 2.9E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 96 | 405 | 46.830902 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 406 | 479 | 12.323307 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 102 | 125 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 517 | - | - |
| Coils | Coil | Coil | 62 | 82 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19400.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_006409060.2 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| Q9NBK5 | Serine/threonine-protein kinase tricornered OS=Drosophila melanogaster OX=7227 GN=trc PE=1 SV=1 | 0 | |
| TrEMBL | V4MDG8 | Serine/threonine-protein kinase tricorner OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022647mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology