Basic Information
Locus ID:
Thhalv10022525m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_11 | 3032012 | 3036293 | + | Thhalv10022525m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 122,182.08 Da | 46.75 | 73.18 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 452 | 700 | 4.55879E-135 | - |
| Pfam | PF04548 | AIG1 family | 483 | 617 | 4.8E-26 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 841 | 1104 | 2.3E-125 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 477 | 618 | 1.64E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 449 | 703 | 3.0E-55 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 359 | 1114 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 480 | 709 | 33.068516 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 820 | 840 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_024016148.1 | translocase of chloroplast 132, chloroplastic [Eutrema salsugineum] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | V4M3S2 | AIG1-type G domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022525mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology