Basic Information
Locus ID:
Thhalv10022323m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3695608 | 3698985 | + | Thhalv10022323m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 123,395.72 Da | 46.17 | 75.66 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 475 | 723 | 5.48777E-134 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 863 | 1126 | 3.4E-123 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 506 | 639 | 2.0E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 500 | 640 | 3.92E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 474 | 729 | 8.7E-55 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 383 | 1126 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 503 | 732 | 32.283867 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 793 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16620.1 | translocon outer complex protein 120. component of TOC complex, plastid protein import machinery. | 0 |
| RefSeq | XP_006406820.2 | translocase of chloroplast 120, chloroplastic [Eutrema salsugineum] | 0 |
| Q9LUS2 | Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC120 PE=1 SV=1 | 0 | |
| TrEMBL | V4M7E0 | AIG1-type G domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022323mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology