Basic Information
Locus ID:
Thhalv10022303m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
molybdenum ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 8517766 | 8519579 | - | Thhalv10022303m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 60,476.99 Da | 43.76 | 82.69 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 437 | 491 | 7.8E-7 | IPR005174 |
| Pfam | PF03404 | Mo-co oxidoreductase dimerisation domain | 43 | 84 | 3.7E-7 | IPR005066 |
| SUPERFAMILY | SSF81296 | E set domains | 33 | 89 | 9.8E-7 | IPR014756 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 204 | 502 | 4.87E-7 | IPR011047 |
| Gene3D | G3DSA:2.60.40.650 | - | 31 | 146 | 3.6E-9 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03730.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_006299119.2 | F-box protein KIB4 [Capsella rubella] | 0 |
| Q9SRV0 | F-box protein KIB4 OS=Arabidopsis thaliana OX=3702 GN=KIB4 PE=3 SV=1 | 0 | |
| TrEMBL | V4LGT0 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022303mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 36 | AT1G10110.1, AT1G27540.1, AT1G27550.1, AT1G27580.1 ... |
| Brassicaceae | Eutrema salsugineum | 24 | Thhalv10002155m.g.v1.0, Thhalv10003011m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp3g02700.v2.2, Sp3g24140.v2.2, Sp3g33180.v2.2 ... |
| Brassicaceae | Brassica nigra | 32 | BniB01g011090.2N, BniB02g015840.2N, BniB02g015860.2N ... |