Basic Information
Locus ID:
Thhalv10022136m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
endonuclease activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 1564978 | 1566092 | + | Thhalv10022136m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 28,822.23 Da | 38.11 | 96.63 | -0.10 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21410.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_024014985.1 | LOW QUALITY PROTEIN: F-box/WD-40 repeat-containing protein 1 [Eutrema salsugineum] | 0 |
| Q4PSN6 | F-box/WD-40 repeat-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=FBW1 PE=2 SV=1 | 0 | |
| TrEMBL | V4LBB7 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022136mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 7 | AT1G77650.1, AT1G77655.1, AT3G08750.1, AT3G10430.1 ... |
| Brassicaceae | Eutrema salsugineum | 9 | Thhalv10000601m.g.v1.0, Thhalv10015788m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g20410.v2.2, Sp6g23470.v2.2 |
| Brassicaceae | Brassica nigra | 17 | BniB01g054610.2N, BniB03g013050.2N, BniB03g013060.2N ... |