Basic Information
Locus ID:
Thhalv10022099m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 9316642 | 9318405 | + | Thhalv10022099m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 37,538.73 Da | 39.22 | 77.97 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 196 | 8.0E-19 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 214 | 5.1E-36 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 219 | 2.0E-24 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 214 | 29.462978 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_006408528.2 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Eutrema salsugineum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | V4NTG4 | NAC domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022099mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology