Basic Information
Locus ID:
Thhalv10021930m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 7963010 | 7965061 | + | Thhalv10021930m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 50,818.28 Da | 55.60 | 86.27 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 137 | 398 | 8.4E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 110 | 399 | 4.99E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 210 | 423 | 1.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 96 | 206 | 1.2E-25 | - |
| SMART | SM00220 | serkin_6 | 133 | 388 | 3.4E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 133 | 380 | 33.516674 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 139 | 161 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 253 | 265 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05140.1 | ROP binding protein kinases 2. | 0 |
| RefSeq | XP_006408109.2 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Eutrema salsugineum] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4M3V6 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021930mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology