Basic Information
Locus ID:
Thhalv10021757m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3292071 | 3293018 | + | Thhalv10021757m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 14,476.05 Da | 16.38 | 83.02 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 31 | 127 | 2.61804E-49 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 41 | 121 | 3.6E-27 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 29 | 127 | 3.13E-35 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 30 | 129 | 4.9E-37 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 30 | 129 | 39.084724 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_006406703.1 | mavicyanin [Eutrema salsugineum] | 0 |
| TrEMBL | V4NNT2 | Phytocyanin domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021757mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology