Basic Information
Locus ID:
Thhalv10021544m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 5408968 | 5410607 | - | Thhalv10021544m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.30 | 22,050.03 Da | 49.15 | 75.42 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 166 | 202 | 1.04326E-16 | - |
| Pfam | PF01849 | NAC domain | 63 | 118 | 1.6E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 164 | 202 | 4.5E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 69 | 122 | 1.6E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 164 | 201 | 2.0E-18 | - |
| SMART | SM01407 | NAC_2 | 63 | 119 | 6.3E-27 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 60 | 125 | 18.078438 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 49 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_006407336.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Eutrema salsugineum] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | V4LY52 | NAC-A/B domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021544mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology