Basic Information
Locus ID:
Thhalv10021475m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BEST Arabidopsis thaliana protein match is HRB1 (HYPERSENSITIVE TO RED AND BLUE)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 7250661 | 7252223 | - | Thhalv10021475m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 24,439.14 Da | 67.67 | 73.50 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05605 | Drought induced 19 protein (Di19), zinc-binding | 45 | 97 | 2.1E-20 | IPR008598 |
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 120 | 218 | 1.7E-28 | IPR027935 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 182 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06760.1 | Drought-responsive family protein. | 0 |
| RefSeq | XP_006407905.1 | protein DEHYDRATION-INDUCED 19 homolog 4 [Eutrema salsugineum] | 0 |
| Q8VXU6 | Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1 | 0 | |
| TrEMBL | E4MXC1 | mRNA, clone: RTFL01-22-D21 OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology