Basic Information
Locus ID:
Thhalv10021051m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 965310 | 968254 | + | Thhalv10021051m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 38,310.89 Da | 48.42 | 86.03 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 26 | 333 | 3.2E-78 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 22 | 335 | 1.44E-85 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 15 | 333 | 7.9E-104 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 11 | 111 | 1.8E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 231 | 280 | 62.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 136 | 213 | 120.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 288 | 343 | 0.18 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 13 | 334 | 47.24791 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22740.1 | homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3) | 0 |
| RefSeq | XP_006406133.1 | homocysteine S-methyltransferase 3 [Eutrema salsugineum] | 0 |
| Q8LAX0 | Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2 | 0 | |
| TrEMBL | V4NME8 | Hcy-binding domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021051mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology