Basic Information
Locus ID:
Thhalv10020984m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3980925 | 3983092 | - | Thhalv10020984m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 41,348.08 Da | 42.26 | 80.93 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 45 | 312 | 1.8918E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 41 | 310 | 3.7E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 310 | 1.35E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 114 | 7.4E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 326 | 4.6E-51 | - |
| PIRSF | PIRSF000654 | ILK | 6 | 323 | 2.3E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 327 | 32.654499 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 161 | 173 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 340 | - | - |
| Coils | Coil | Coil | 304 | 324 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006406905.1 | PTI1-like tyrosine-protein kinase At3g15890 [Eutrema salsugineum] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | V4M7L3 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020984mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology