Basic Information
Locus ID:
Thhalv10020819m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 9267871 | 9269943 | - | Thhalv10020819m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 46,090.91 Da | 39.21 | 73.91 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 117 | 385 | 4.26164E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 113 | 385 | 8.2E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 385 | 9.16E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 100 | 195 | 3.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 396 | 3.3E-60 | - |
| SMART | SM00220 | serkin_6 | 111 | 388 | 2.8E-59 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 171 | 394 | 2.5E-33 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 19 | 125 | 59.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 388 | 41.45998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 252 | 264 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 246 | 264 | 2.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 208 | 221 | 2.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 312 | 334 | 2.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 356 | 378 | 2.8E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006408511.1 | serine/threonine-protein kinase STY13 [Eutrema salsugineum] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | V4M1F2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020819mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology