Basic Information
Locus ID:
Thhalv10020742m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 5073434 | 5077306 | - | Thhalv10020742m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 48,250.89 Da | 38.49 | 115.87 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 290 | 428 | 4.5E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 99 | 254 | 2.6E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 128 | 267 | 1.6E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 275 | 432 | 3.7E-19 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 80 | 431 | 1.1E-101 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 64 | 431 | 2.2E-121 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_024015405.1 | vacuolar cation/proton exchanger 2 [Eutrema salsugineum] | 0 |
| Q39254 | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=CAX2 PE=1 SV=2 | 0 | |
| TrEMBL | V4M8J1 | Vacuolar cation/proton exchanger OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020742mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology