Basic Information
Locus ID:
Thhalv10020689m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 6638034 | 6639419 | - | Thhalv10020689m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 49,644.87 Da | 42.41 | 85.21 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 9 | 89 | 5.79851E-24 | - |
| Pfam | PF02214 | BTB/POZ domain | 9 | 94 | 1.6E-13 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 7 | 98 | 8.64E-17 | IPR011333 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 120 | 359 | 1.37E-7 | IPR011044 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 99 | 1.2E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 7 | 106 | 2.0E-5 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_006407718.1 | BTB/POZ domain-containing protein At3g09030 [Eutrema salsugineum] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | V4NRB5 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020689mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology