Basic Information
Locus ID:
Thhalv10020672m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3387495 | 3389653 | + | Thhalv10020672m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 52,817.59 Da | 45.80 | 89.12 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 162 | 428 | 2.06209E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 157 | 424 | 8.8E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 438 | 3.1E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 136 | 231 | 6.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 232 | 443 | 4.8E-66 | - |
| SMART | SM00220 | serkin_6 | 156 | 435 | 1.4E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 156 | 435 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 278 | 290 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 162 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 468 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17420.1 | glyoxysomal protein kinase 1. serine/threonine protein kinase-like protein | 0 |
| RefSeq | XP_006406732.1 | probable receptor-like protein kinase At3g17420 [Eutrema salsugineum] | 0 |
| Q9LRP3 | Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana OX=3702 GN=At3g17420 PE=1 SV=1 | 0 | |
| TrEMBL | V4LCM1 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020672mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology