Basic Information
Locus ID:
Thhalv10020600m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 7441020 | 7443466 | + | Thhalv10020600m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 54,652.91 Da | 31.45 | 115.82 | 0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 283 | 471 | 1.7E-27 | IPR006153 |
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 231 | 1.4E-23 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 197 | 2.1E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 3.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 3.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 3.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 3.0E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06370.1 | sodium hydrogen exchanger 4. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_024015379.1 | sodium/hydrogen exchanger 3 [Eutrema salsugineum] | 0 |
| Q84WG1 | Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana OX=3702 GN=NHX3 PE=1 SV=2 | 0 | |
| TrEMBL | V4MAD5 | Sodium/hydrogen exchanger OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020600mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology