Basic Information
Locus ID:
Thhalv10020432m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 8000498 | 8005079 | + | Thhalv10020432m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 61,602.28 Da | 36.43 | 107.67 | 0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 32 | 445 | 3.1E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 149 | 200 | 3.2E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 29 | 461 | 2.5E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 116 | 124 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 101 | 115 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 156 | 166 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 87 | 98 | 2.0E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_006408118.1 | sodium/hydrogen exchanger 2 [Eutrema salsugineum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | E4MYB2 | Sodium/hydrogen exchanger OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology