Basic Information
Locus ID:
Thhalv10020364m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 5449598 | 5453498 | + | Thhalv10020364m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 66,262.22 Da | 51.90 | 86.11 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 19 | 303 | 3.2E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 326 | 2.35E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 314 | 2.8E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 103 | 9.9E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 308 | 33.361202 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 171 | 183 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 352 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12200.1 | NIMA-related kinase 7. Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_006407356.1 | serine/threonine-protein kinase Nek7 [Eutrema salsugineum] | 0 |
| Q9LHI7 | Serine/threonine-protein kinase Nek7 OS=Arabidopsis thaliana OX=3702 GN=NEK7 PE=2 SV=1 | 0 | |
| TrEMBL | V4M8T6 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020364mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology