Basic Information
Locus ID:
Thhalv10020326m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 2660935 | 2664301 | - | Thhalv10020326m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 67,969.82 Da | 52.99 | 81.95 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 152 | 412 | 6.79301E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 153 | 413 | 5.1E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 435 | 1.62E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 442 | 595 | 3.66E-14 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 241 | 433 | 1.7E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 434 | 592 | 1.8E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 453 | 522 | 1.8E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 153 | 240 | 1.2E-21 | - |
| SMART | SM00220 | serkin_6 | 151 | 413 | 1.1E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 151 | 413 | 50.731884 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 157 | 183 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 275 | 287 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 135 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19100.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006406536.1 | CDPK-related kinase 2 [Eutrema salsugineum] | 0 |
| Q9LJL9 | CDPK-related kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LW06 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020326mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology