Basic Information
Locus ID:
Thhalv10020304m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 8841926 | 8844534 | - | Thhalv10020304m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 67,268.73 Da | 46.90 | 94.21 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 67 | 125 | 8.3E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 344 | 604 | 2.5E-36 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 63 | 2.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 206 | 9.78E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 607 | 2.29E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 224 | 6.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 137 | 1.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 414 | 2.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 618 | 6.9E-48 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 340 | 615 | 31.410707 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02880.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006408370.1 | probable inactive receptor kinase At3g02880 isoform X1 [Eutrema salsugineum] | 0 |
| Q9M8T0 | Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=At3g02880 PE=1 SV=1 | 0 | |
| TrEMBL | V4MBH6 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020304mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology