Basic Information
Locus ID:
Thhalv10020262m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
ATP binding kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3221151 | 3224148 | - | Thhalv10020262m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 70,507.69 Da | 33.10 | 96.27 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 372 | 639 | 5.88963E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 369 | 633 | 6.0E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 180 | 6.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 4.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 212 | 6.24E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 637 | 1.18E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 440 | 5.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 230 | 9.7E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 646 | 6.7E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 640 | 33.375336 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 394 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17840.1 | receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. | 0 |
| RefSeq | XP_006406685.1 | probable inactive receptor kinase RLK902 [Eutrema salsugineum] | 0 |
| Q9LVI6 | Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1 | 0 | |
| TrEMBL | V4M727 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020262mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology