Basic Information
Locus ID:
Thhalv10020219m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 7359033 | 7362929 | - | Thhalv10020219m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 75,065.88 Da | 43.27 | 83.19 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 187 | 628 | 2.4E-216 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 205 | 629 | 3.02E-52 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 214 | 615 | 2.7E-12 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 176 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06500.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_006407938.1 | alkaline/neutral invertase C, mitochondrial [Eutrema salsugineum] | 0 |
| B9DFA8 | Alkaline/neutral invertase C, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=INVC PE=1 SV=1 | 0 | |
| TrEMBL | V4NRV0 | Alkaline/neutral invertase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020219mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology