Basic Information
Locus ID:
Thhalv10020172m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
AT3G13670 (E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 4916421 | 4921085 | - | Thhalv10020172m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 78,713.82 Da | 43.53 | 73.90 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 137 | 412 | 2.02106E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 137 | 379 | 3.3E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 137 | 420 | 1.78E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 451 | 2.6E-80 | - |
| SMART | SM00220 | serkin_6 | 137 | 435 | 3.0E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 137 | 435 | 23.693544 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 263 | 275 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 143 | 175 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_006407187.1 | casein kinase 1-like protein HD16 [Eutrema salsugineum] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | V4LDW5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020172mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology