Basic Information
Locus ID:
Thhalv10020163m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Cytosolic domain of 10TM putative phosphate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 9119888 | 9123919 | - | Thhalv10020163m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 81,135.87 Da | 42.49 | 107.66 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 166 | 3.2E-37 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 620 | 4.6E-74 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 342 | 9.2E-33 | IPR027815 |
| Coils | Coil | Coil | 274 | 294 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_006408462.1 | CSC1-like protein HYP1 [Eutrema salsugineum] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LHA7 | CSC1-like protein HYP1 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020163mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology