Basic Information
Locus ID:
Thhalv10019932m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 5042977 | 5046477 | - | Thhalv10019932m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 126,894.62 Da | 31.50 | 95.62 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 667 | 725 | 6.3E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 862 | 1132 | 2.0E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 280 | 340 | 1.1E-6 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 204 | 217 | 0.78 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 125 | 141 | 0.19 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 378 | 400 | 0.091 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 478 | 500 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 74 | 3.0E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 841 | 1134 | 1.34E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 399 | 9.42E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 370 | 743 | 1.53E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 758 | 0.0 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 822 | 935 | 5.3E-37 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 581 | 638 | 0.0 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 936 | 1155 | 1.1E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 664 | 687 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 688 | 711 | 33.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 860 | 1138 | 2.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 477 | 500 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 524 | 548 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 712 | 733 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 451 | 475 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 376 | 400 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 860 | 1138 | 38.604912 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 983 | 995 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 866 | 889 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_006407229.1 | receptor-like protein kinase BRI1-like 3 [Eutrema salsugineum] | 0 |
| Q9LJF3 | Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 | 0 | |
| TrEMBL | V4M1I3 | non-specific serine/threonine protein kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019932mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology