Basic Information
Locus ID:
Thhalv10019909m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3213612 | 3220549 | + | Thhalv10019909m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 146,077.38 Da | 57.46 | 73.43 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 915 | 1200 | 1.05591E-169 | - |
| Pfam | PF00069 | Protein kinase domain | 909 | 1195 | 6.6E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 906 | 1234 | 3.37E-90 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 993 | 1213 | 1.7E-107 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 907 | 1224 | 1.7E-107 | - |
| SMART | SM00220 | serkin_6 | 909 | 1195 | 4.9E-103 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 909 | 1195 | 52.781315 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1196 | 1301 | 9.640562 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1028 | 1040 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1248 | 1278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 770 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1077 | 1093 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1261 | 1278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1068 | 1093 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006406684.1 | probable serine/threonine protein kinase IREH1 [Eutrema salsugineum] | 0 |
| F4J6F6 | Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1 | 0 | |
| TrEMBL | V4M029 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019909mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology