Basic Information
Locus ID:
Thhalv10019874m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 3403011 | 3413354 | - | Thhalv10019874m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 232,335.05 Da | 44.00 | 84.86 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 175 | 524 | 0.0 | - |
| Pfam | PF00225 | Kinesin motor domain | 206 | 515 | 2.2E-105 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 176 | 550 | 5.02E-114 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 167 | 544 | 1.7E-132 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 174 | 523 | 2.2E-158 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 176 | 515 | 110.702507 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 411 | 422 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 412 | 430 | 2.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 465 | 486 | 2.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 248 | 269 | 2.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 379 | 396 | 2.0E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2035 | 2058 | - | - |
| Coils | Coil | Coil | 1254 | 1288 | - | - |
| Coils | Coil | Coil | 2019 | 2039 | - | - |
| Coils | Coil | Coil | 1738 | 1758 | - | - |
| Coils | Coil | Coil | 657 | 677 | - | - |
| Coils | Coil | Coil | 1039 | 1059 | - | - |
| Coils | Coil | Coil | 1553 | 1573 | - | - |
| Coils | Coil | Coil | 1518 | 1545 | - | - |
| Coils | Coil | Coil | 522 | 549 | - | - |
| Coils | Coil | Coil | 1462 | 1482 | - | - |
| Coils | Coil | Coil | 608 | 628 | - | - |
| Coils | Coil | Coil | 691 | 711 | - | - |
| Coils | Coil | Coil | 1953 | 1994 | - | - |
| Coils | Coil | Coil | 1589 | 1609 | - | - |
| Coils | Coil | Coil | 1645 | 1700 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_024015768.1 | kinesin-like protein KIN-12C [Eutrema salsugineum] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | V4M071 | Kinesin motor domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019874mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology