Basic Information
Locus ID:
Thhalv10019870m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_13 | 2682114 | 2695340 | - | Thhalv10019870m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 278,102.22 Da | 50.90 | 89.10 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 208 | 284 | 2.3E-9 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 291 | 499 | 4.2E-78 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 202 | 532 | 3.93E-102 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 196 | 528 | 2.3E-111 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 200 | 507 | 1.6E-132 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 279 | 499 | 82.125229 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 395 | 406 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 449 | 470 | 3.5E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 396 | 414 | 3.5E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 274 | 295 | 3.5E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 363 | 380 | 3.5E-30 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 142 | - | - |
| Coils | Coil | Coil | 867 | 908 | - | - |
| Coils | Coil | Coil | 1999 | 2054 | - | - |
| Coils | Coil | Coil | 1244 | 1292 | - | - |
| Coils | Coil | Coil | 2346 | 2380 | - | - |
| Coils | Coil | Coil | 1698 | 1718 | - | - |
| Coils | Coil | Coil | 1779 | 1799 | - | - |
| Coils | Coil | Coil | 2165 | 2192 | - | - |
| Coils | Coil | Coil | 2251 | 2327 | - | - |
| Coils | Coil | Coil | 608 | 628 | - | - |
| Coils | Coil | Coil | 1167 | 1187 | - | - |
| Coils | Coil | Coil | 506 | 533 | - | - |
| Coils | Coil | Coil | 1008 | 1091 | - | - |
| Coils | Coil | Coil | 1386 | 1420 | - | - |
| Coils | Coil | Coil | 1869 | 1921 | - | - |
| Coils | Coil | Coil | 1621 | 1648 | - | - |
| Coils | Coil | Coil | 1838 | 1858 | - | - |
| Coils | Coil | Coil | 1488 | 1515 | - | - |
| Coils | Coil | Coil | 1128 | 1148 | - | - |
| Coils | Coil | Coil | 2062 | 2096 | - | - |
| Coils | Coil | Coil | 747 | 774 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_024015333.1 | kinesin-like protein KIN-12D [Eutrema salsugineum] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | V4LZS2 | Kinesin motor domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019870mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology