Basic Information
Locus ID:
Thhalv10019640m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 3390128 | 3392950 | + | Thhalv10019640m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 74,376.11 Da | 47.34 | 84.20 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 631 | 1.15883E-89 | - |
| CDD | cd01989 | STK_N | 11 | 145 | 1.48022E-51 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 630 | 3.9E-40 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 14 | 138 | 8.0E-6 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 14 | 143 | 6.11E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 631 | 5.93E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 661 | 6.5E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 341 | 444 | 2.9E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 144 | 1.1E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 372 | 635 | 1.3E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 635 | 34.732197 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 228 | - | - |
| Coils | Coil | Coil | 260 | 280 | - | - |
| Coils | Coil | Coil | 322 | 352 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024009133.1 | U-box domain-containing protein 35 [Eutrema salsugineum] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | V4KDN7 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019640mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology