Basic Information
Locus ID:
Thhalv10019425m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 8639628 | 8640184 | - | Thhalv10019425m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 17,555.96 Da | 40.71 | 90.45 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 109 | 3.0E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 138 | 1.48E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 125 | 1.7E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 124 | 10.025966 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11900.9 | - | 0 |
| RefSeq | XP_006391384.2 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 [Eutrema salsugineum] | 0 |
| Q9T058 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 OS=Arabidopsis thaliana OX=3702 GN=At4g11900 PE=2 SV=1 | 0 | |
| TrEMBL | V4JTM4 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019425mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg50583 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30116040 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10019425m.g.v1.0 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1618 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9148 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7AG0570250 |
| Poaceae | Oryza coarctata | 1 | Oco09G013380 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG009480 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-23866, nbisL1-mrna-23880 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132620138 |
| Zosteraceae | Zostera marina | 2 | Zosma03g09360.v3.1, Zosma150g00030.v3.1 |