Basic Information
Locus ID:
Thhalv10019328m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 1208941 | 1209788 | - | Thhalv10019328m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 13,259.24 Da | 42.30 | 96.72 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 95 | 3.36367E-44 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 117 | 2.2E-39 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 97 | 1.13E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 4.8E-36 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 119 | 1.0E-45 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 72 | 9.6566 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77870.1 | membrane-anchored ubiquitin-fold protein 5 precursor. | 0 |
| RefSeq | XP_006390044.1 | membrane-anchored ubiquitin-fold protein 5 [Eutrema salsugineum] | 0 |
| Q9SH14 | Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MUB5 PE=1 SV=1 | 0 | |
| TrEMBL | V4JQ41 | Membrane-anchored ubiquitin-fold protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10019328mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology