Basic Information
Locus ID:
Thhalv10018908m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 1794292 | 1796402 | + | Thhalv10018908m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 35,636.11 Da | 35.63 | 90.67 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 14 | 304 | 6.9E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 308 | 2.16E-95 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 312 | 7.2E-70 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 100 | 1.3E-31 | - |
| SMART | SM00220 | serkin_6 | 14 | 304 | 4.7E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 304 | 45.459904 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 141 | 153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 0 |
| RefSeq | XP_006390181.1 | cyclin-dependent kinase B2-1 [Eutrema salsugineum] | 0 |
| Q8LF80 | Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana OX=3702 GN=CDKB2-1 PE=1 SV=2 | 0 | |
| TrEMBL | V4KCI7 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018908mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology