Basic Information
Locus ID:
Thhalv10018763m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 269947 | 271339 | + | Thhalv10018763m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 39,282.92 Da | 34.09 | 81.93 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 4 | 35 | 5.5E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 110 | 153 | 5.8E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 167 | 202 | 1.2E-6 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 45 | 2.75E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 345 | 4.18E-37 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 35 | 348 | 6.4E-32 | IPR015915 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 9.9E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.0013 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006389793.1 | F-box/kelch-repeat protein At1g80440 [Eutrema salsugineum] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | V4K7X0 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018763mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology