Basic Information
Locus ID:
Thhalv10018427m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 8408218 | 8410956 | + | Thhalv10018427m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 54,467.95 Da | 38.84 | 94.11 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 35 | 354 | 7.7E-81 | IPR000490 |
| Pfam | PF07983 | X8 domain | 372 | 442 | 4.8E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 35 | 354 | 3.44E-86 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 365 | 461 | 3.5E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 34 | 360 | 1.1E-113 | - |
| SMART | SM00768 | X8_cls | 371 | 456 | 1.7E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 269 | 282 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_006391369.1 | glucan endo-1,3-beta-glucosidase 2 [Eutrema salsugineum] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | V4JTK9 | glucan endo-1,3-beta-D-glucosidase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018427mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology