Basic Information
Locus ID:
Thhalv10018240m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 4408813 | 4411507 | + | Thhalv10018240m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 73,764.59 Da | 39.88 | 86.39 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 339 | 603 | 9.88991E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 49 | 139 | 2.8E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 248 | 2.6E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 334 | 545 | 2.1E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 318 | 636 | 2.02E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 150 | 251 | 1.5E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 141 | 1.0E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 292 | 408 | 1.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 409 | 612 | 1.9E-59 | - |
| SMART | SM00220 | serkin_6 | 333 | 577 | 3.6E-32 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 251 | 14.796107 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 616 | 36.866432 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 141 | 15.456911 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 454 | 466 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 339 | 361 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 654 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006390874.1 | cysteine-rich receptor-like protein kinase 3 [Eutrema salsugineum] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 | |
| TrEMBL | V4JSB8 | Cysteine-rich receptor-like protein kinase 3 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018240mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology