Basic Information
Locus ID:
Thhalv10018218m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
STE20 SPS1-related proline-alanine-rich protein kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 504495 | 509346 | + | Thhalv10018218m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 76,120.36 Da | 47.43 | 85.58 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06610 | STKc_OSR1_SPAK | 13 | 274 | 3.84707E-170 | - |
| Pfam | PF00069 | Protein kinase domain | 13 | 274 | 1.5E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 275 | 1.25E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 329 | 1.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 89 | 2.5E-28 | - |
| SMART | SM00220 | serkin_6 | 13 | 274 | 9.4E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 274 | 45.968727 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 42 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 501 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
| Coils | Coil | Coil | 662 | 682 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79640.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024006720.1 | serine/threonine-protein kinase OSR1 isoform X3 [Eutrema salsugineum] | 0 |
| Q551H4 | Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum OX=44689 GN=fray2 PE=3 SV=1 | 0 | |
| TrEMBL | V4JPP4 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018218mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology