Basic Information
Locus ID:
Thhalv10018181m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 1481610 | 1485133 | + | Thhalv10018181m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 82,834.13 Da | 50.86 | 89.25 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 412 | 676 | 2.43814E-86 | - |
| CDD | cd00293 | USP_Like | 20 | 150 | 2.74181E-8 | - |
| Pfam | PF00582 | Universal stress protein family | 19 | 150 | 2.1E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 409 | 609 | 4.5E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 674 | 3.1E-76 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 150 | 5.44E-5 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 154 | 1.3E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 701 | 2.7E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 480 | 1.5E-28 | - |
| SMART | SM00220 | serkin_6 | 406 | 674 | 1.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 681 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 527 | 539 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 412 | 434 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006390104.1 | probable receptor-like serine/threonine-protein kinase At5g57670 [Eutrema salsugineum] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | V4JQ86 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018181mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology