Basic Information
Locus ID:
Thhalv10018124m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 5266887 | 5273009 | + | Thhalv10018124m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 91,091.24 Da | 53.31 | 65.04 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06613 | STKc_MAP4K3_like | 241 | 496 | 7.00842E-173 | - |
| Pfam | PF00069 | Protein kinase domain | 242 | 496 | 8.0E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 239 | 497 | 3.64E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 238 | 535 | 6.7E-99 | - |
| SMART | SM00220 | serkin_6 | 242 | 496 | 2.2E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 242 | 496 | 50.562279 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 248 | 271 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69220.1 | Protein kinase superfamily protein. Encodes a putative serine/threonine kinase (SIK1). | 0 |
| RefSeq | XP_006391042.1 | serine/threonine-protein kinase dst1 [Eutrema salsugineum] | 0 |
| O24527 | Serine/threonine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SIK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4KM12 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018124mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34836, jg9248 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18856 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah007629 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g136320 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14035, Sbi_jg51923 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg9948 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00023553, GOSA_00023554 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl34859, Sgl40253 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000003050, gene:ENSEOMG00000003646 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0016970, CQ.Regalona.r1.6BG0018080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30226970 |
| Apiaceae | Apium graveolens | 1 | Ag6G00447 |
| Arecaceae | Cocos nucifera | 1 | COCNU_14G011310 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704487 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.1971.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G26331 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G69220.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018124m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g24270.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g046590.2N, BniB05g066160.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0426 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0436 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g03070 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0038s00019.v1.0, Dusal.0038s00020.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g29670 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.391 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015287 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G32591 |
| Poaceae | Echinochloa crus-galli | 3 | BH01.692, CH01.674, Contig309.50 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0215610, gene-QOZ80_3BG0260700 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0511440.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_061779 |
| Poaceae | Oryza coarctata | 2 | Oco05G023930, Oco06G024810 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g54780.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G076900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107228 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G028840, Chr07G027840, Chr12G037380 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G623800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG057130, gene_TRIDC5BG061270 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G392500.1, TraesCS5B02G397300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb057640_P003 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-15100, nbis-gene-16203 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2767, Zma_g457 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.505, evm.TU.LG21.202 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g06300 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.533 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26694 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11802 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15830 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.267 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002699 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11398 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23529 |
| Salicaceae | Populus euphratica | 1 | populus_peu20715 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641950 |
| Solanaceae | Solanum chilense | 1 | SOLCI003152200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020616 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_17948 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G0468 |
| Zosteraceae | Zostera marina | 1 | Zosma06g22620.v3.1 |