Basic Information
Locus ID:
Thhalv10018023m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 542978 | 548653 | + | Thhalv10018023m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 137,564.66 Da | 47.63 | 71.07 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 976 | 1233 | 4.17027E-101 | - |
| CDD | cd06410 | PB1_UP2 | 179 | 275 | 5.03412E-45 | - |
| Pfam | PF00564 | PB1 domain | 192 | 275 | 2.3E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 971 | 1232 | 4.7E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 192 | 277 | 3.38E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 961 | 1231 | 4.02E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1058 | 1253 | 2.1E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 963 | 1057 | 2.6E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 194 | 277 | 4.7E-9 | - |
| SMART | SM00220 | serkin_6 | 970 | 1236 | 7.5E-55 | IPR000719 |
| SMART | SM00666 | PB1_new | 190 | 277 | 7.2E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 970 | 1235 | 40.668476 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 976 | 1001 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1204 | 1226 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1089 | 1107 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1052 | 1065 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1160 | 1182 | 1.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 640 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_006389873.1 | uncharacterized protein LOC18008984 [Eutrema salsugineum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | V4K835 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018023mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology