Basic Information
Locus ID:
Thhalv10018002m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_9 | 4151164 | 4157425 | - | Thhalv10018002m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 184,582.34 Da | 51.30 | 75.39 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 334 | 606 | 1.44603E-131 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1372 | 1635 | 1.90963E-150 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 356 | 595 | 1.2E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1411 | 1576 | 1.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 400 | 572 | 7.59E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1355 | 1635 | 2.4E-82 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 399 | 572 | 1.4E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1330 | 1492 | 1.6E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1493 | 1636 | 2.4E-41 | - |
| SMART | SM00330 | PIPK_2 | 1342 | 1636 | 1.3E-117 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1309 | 1635 | 59.338051 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1075 | 1120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1088 | 1103 | - | - |
| Coils | Coil | Coil | 992 | 1019 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_006390816.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Eutrema salsugineum] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | V4KE71 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018002mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology