Basic Information
Locus ID:
Thhalv10017958m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
MAP kinase kinase kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 1757931 | 1758250 | - | Thhalv10017958m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 10,653.27 Da | 49.35 | 83.33 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 91 | 4.1E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 91 | 4.1E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 96 | 1.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 96 | 20.386187 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 15 | 27 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40560.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006409746.1 | mitogen-activated protein kinase kinase kinase 5 [Eutrema salsugineum] | 0 |
| O75716 | Serine/threonine-protein kinase 16 OS=Homo sapiens OX=9606 GN=STK16 PE=1 SV=4 | 0 | |
| TrEMBL | V4MF97 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017958mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G40500.1, AT2G40560.1 |
| Brassicaceae | Eutrema salsugineum | 9 | Thhalv10012219m.g.v1.0, Thhalv10017514m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g04290.v2.2, Sp2g09540.v2.2 |
| Brassicaceae | Brassica nigra | 15 | BniB01g004780.2N, BniB02g062010.2N, BniB03g062440.2N ... |