Basic Information
Locus ID:
Thhalv10017946m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 6004761 | 6006016 | - | Thhalv10017946m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 22,638.05 Da | 32.64 | 96.92 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 128 | 7.8E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 167 | 1.59E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 60 | 129 | 1.5E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 59 | 1.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 173 | 5.0E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 195 | 18.633572 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30980.1 | SHAGGY-related protein kinase dZeta. Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. | 0 |
| RefSeq | XP_024004103.1 | shaggy-related protein kinase zeta [Eutrema salsugineum] | 0 |
| Q39010 | Shaggy-related protein kinase zeta OS=Arabidopsis thaliana OX=3702 GN=ASK6 PE=1 SV=2 | 0 | |
| TrEMBL | V4M9A3 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v100179460mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl18664 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10017556m.g.v1.0, Thhalv10017932m.g.v1.0 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G689200, Tel6E01G788200 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG055520, gene_TRIDC4AG054470 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G361800.1, TraesCS4A02G365100.1 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23604 |