Basic Information
Locus ID:
Thhalv10017932m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 6057473 | 6058570 | - | Thhalv10017932m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 20,848.94 Da | 31.32 | 102.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 1 | 181 | 1.17904E-120 | IPR039192 |
| Pfam | PF00069 | Protein kinase domain | 4 | 118 | 8.5E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 123 | 175 | 1.0E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 179 | 1.64E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 61 | 121 | 2.4E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 60 | 1.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 122 | 180 | 1.9E-20 | - |
| SMART | SM00220 | serkin_6 | 1 | 181 | 4.4E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 181 | 22.435617 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 105 | 117 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30980.1 | SHAGGY-related protein kinase dZeta. Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. | 0 |
| RefSeq | XP_010469777.1 | PREDICTED: shaggy-related protein kinase zeta-like [Camelina sativa] | 0 |
| Q39010 | Shaggy-related protein kinase zeta OS=Arabidopsis thaliana OX=3702 GN=ASK6 PE=1 SV=2 | 0 | |
| TrEMBL | V4MGJ3 | non-specific serine/threonine protein kinase (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017932mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl18664 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10017556m.g.v1.0, Thhalv10017932m.g.v1.0 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G689200, Tel6E01G788200 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG055520, gene_TRIDC4AG054470 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G361800.1, TraesCS4A02G365100.1 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23604 |