Basic Information
Locus ID:
Thhalv10017839m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 8257467 | 8258816 | + | Thhalv10017839m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 48,602.99 Da | 36.06 | 77.51 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 86 | 445 | 9.46411E-77 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 289 | 441 | 2.8E-25 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 87 | 261 | 1.5E-55 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 80 | 446 | 3.0E-87 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 65 | 261 | 4.8E-54 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 269 | 448 | 1.1E-43 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 87 | 441 | 43.240993 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 325 | 336 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 102 | 113 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 325 | 336 | 8.2E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 93 | 113 | 8.2E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35615.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_006410723.1 | probable aspartic protease At2g35615 [Eutrema salsugineum] | 0 |
| Q3EBM5 | Probable aspartic protease At2g35615 OS=Arabidopsis thaliana OX=3702 GN=At2g35615 PE=3 SV=1 | 0 | |
| TrEMBL | V4NYY8 | Peptidase A1 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017839mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology