Basic Information
Locus ID:
Thhalv10016634m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 8382646 | 8385827 | - | Thhalv10016634m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 49,769.37 Da | 54.56 | 49.54 | -1.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 247 | 330 | 1.5E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 114 | - | - |
| Coils | Coil | Coil | 262 | 282 | - | - |
| Coils | Coil | Coil | 380 | 400 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_006410758.1 | protein WVD2-like 4 isoform X1 [Eutrema salsugineum] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | V4NZ22 | TPX2 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016634mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology