Basic Information
Locus ID:
Thhalv10016499m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CPK14
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 11400965 | 11403460 | - | Thhalv10016499m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 60,284.63 Da | 33.88 | 87.55 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 431 | 493 | 1.5309E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 2.93118E-137 | - |
| Pfam | PF13833 | EF-hand domain pair | 372 | 419 | 6.3E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 2.5E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 54 | 312 | 3.5E-76 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 320 | 1.16E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 519 | 2.38E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 4.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 139 | 2.8E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 496 | 3.7E-45 | - |
| SMART | SM00220 | serkin_6 | 54 | 312 | 1.2E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 359 | 387 | 0.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 395 | 423 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 3.8E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 467 | 495 | 6.4E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 10.245409 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 49.40329 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 462 | 11.02648 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 87 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| Coils | Coil | Coil | 446 | 466 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41860.1 | calcium-dependent protein kinase 14. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_006411456.1 | calcium-dependent protein kinase 14 [Eutrema salsugineum] | 0 |
| P93759 | Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CPK14 PE=2 SV=1 | 0 | |
| TrEMBL | V4M987 | Calcium-dependent protein kinase 30 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016499mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology