Basic Information
Locus ID:
Thhalv10016430m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CPK24
Description:
ATP binding calcium ion binding calmodulin-dependent protein kinase kinase protein kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 6442661 | 6445221 | + | Thhalv10016430m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 66,039.84 Da | 40.63 | 80.19 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 66 | 324 | 5.21828E-134 | - |
| Pfam | PF13499 | EF-hand domain pair | 443 | 507 | 1.7E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 67 | 325 | 4.4E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 375 | 431 | 4.5E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 519 | 3.57E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 326 | 5.53E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 333 | 1.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 152 | 6.3E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 334 | 510 | 1.2E-47 | - |
| SMART | SM00220 | serkin_6 | 67 | 325 | 1.0E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 481 | 509 | 1.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 372 | 400 | 5.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 444 | 472 | 3.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 408 | 436 | 0.082 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 9.464338 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 325 | 50.152393 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 13.871811 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 403 | 14.373928 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 96 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 381 | 393 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 417 | 429 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_006410285.1 | calcium-dependent protein kinase 24 isoform X1 [Eutrema salsugineum] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | V4MGQ3 | Calcium-dependent protein kinase 24 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016430mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology