Basic Information
Locus ID:
Thhalv10016403m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 10613638 | 10616308 | - | Thhalv10016403m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 69,013.80 Da | 49.21 | 86.16 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14133 | PKc_DYRK_like | 296 | 598 | 8.28323E-142 | - |
| Pfam | PF00069 | Protein kinase domain | 298 | 598 | 1.5E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 601 | 1.07E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 290 | 377 | 1.5E-94 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 350 | 598 | 1.5E-94 | - |
| SMART | SM00220 | serkin_6 | 296 | 598 | 2.2E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 296 | 598 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 110 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40120.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006411264.1 | serine/threonine-protein kinase ppk15 [Eutrema salsugineum] | 0 |
| Q9P6P3 | Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ppk15 PE=1 SV=1 | 0 | |
| TrEMBL | V4MC25 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016403mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology